NMRPipe from Structbio Cluster

  • NMRPipe and its companion software for both Linux and SGI have been installed at the mount point:
    /sb/apps/NMRPipe

  • This program should be available on all structbio computers provided the required directory is mounted on your computer. I recommend adding the following lines to your .cshrc file. This will automatically detect the specific UNIX platform you are on and will execute the right version of nmrPipe required for your computer.
    if (-x /bin/uname) then
    set PIPE_TYPE = ( `/bin/uname -s`)
    else if (-x /usr/bin/uname) then
    set PIPE_TYPE = (`/usr/bin/uname -s`)
    else
    echo "Cannot find uname executable."
    endif

    switch( $PIPE_TYPE )
    case 'Linux':
    source /sb/apps/NMRPipe//com/nmrInit.linux.com
    source /sb/apps/NMRPipe/com/font.com
    breaksw
    case 'IRIX64':
    source /sb/apps/NMRPipe/com/nmrInit.sgi6x.com
    source /sb/apps/NMRPipe/com/font.com
    breaksw
    endsw