Software Resources in the Structural Biology Center
Please note that all software managed
by this resource are to be used exclusively for academic, non-commercial
activities, and the license agreements must be followed to the letter to
avoid fines and other penalties. Also note that some software licenses
require the end-user to provide appropriate acknowledgment in published work
that is derived from its use.
The pages linked under Software Packages explain how to get started
with each program or package. Documentation and Tutorials specific to using
a particular piece of software can be found on that software's page.
More general software-related topics are covered in the
General topics and HOW-TOs section.
Check back often, as this will be expanded as time permits.
Software Packages |
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Accelrys (MSI) |
InsightII, Discover, Felix, etc.
|
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AMBER |
Molecular mechanics and NMR structure refinement
|
|
Curves |
Analysis of nucleic acid helicoidal parameters
|
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Dino |
Visualization of structural biology data |
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GENXPK |
NMR resonance assignment and crosspeak management tool |
|
Grasp |
Graphical Representation and Analysis of
Structural Properties |
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Modeller |
Comparitive (homology) modeling of protein structure |
|
Molscript |
Displays 3D molecular structures in cartoon and/or all-atom
representations |
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MSMS |
Computation of molecular surfaces and
surface areas |
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RasMol |
Simple but useful PDB viewer for biomolecular structures |
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SANE |
Structure Assisted NOE Evaluation |
|
SGI Freeware |
Freeware utilities available on IRIX systems |
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